CDS

Accession Number TCMCG017C15544
gbkey CDS
Protein Id OMO92491.1
Location join(20270..20476,20567..20626,20921..20980,21165..21236,21368..21424,21727..21803,22412..22493,22635..22751,23140..23267,23441..23510,23924..23971)
GeneID InterPro:IPR001510
Organism Corchorus olitorius
locus_tag COLO4_17542

Protein

Length 325aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016357.1
Definition Zinc finger, PARP-type [Corchorus olitorius]
Locus_tag COLO4_17542

EGGNOG-MAPPER Annotation

COG_category KLO
Description polynucleotide
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08073        [VIEW IN KEGG]
EC 2.7.1.78        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
3.1.3.32        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010835        [VIEW IN EMBL-EBI]
GO:0010836        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032204        [VIEW IN EMBL-EBI]
GO:0032206        [VIEW IN EMBL-EBI]
GO:0032210        [VIEW IN EMBL-EBI]
GO:0032212        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0042769        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046403        [VIEW IN EMBL-EBI]
GO:0046404        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046939        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051731        [VIEW IN EMBL-EBI]
GO:0051733        [VIEW IN EMBL-EBI]
GO:0051734        [VIEW IN EMBL-EBI]
GO:0051972        [VIEW IN EMBL-EBI]
GO:0051973        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098501        [VIEW IN EMBL-EBI]
GO:0098502        [VIEW IN EMBL-EBI]
GO:0098503        [VIEW IN EMBL-EBI]
GO:0098504        [VIEW IN EMBL-EBI]
GO:0098506        [VIEW IN EMBL-EBI]
GO:0098518        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1904353        [VIEW IN EMBL-EBI]
GO:1904355        [VIEW IN EMBL-EBI]
GO:1904356        [VIEW IN EMBL-EBI]
GO:1904358        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000278        [VIEW IN EMBL-EBI]
GO:2000573        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCCTCCAATATTGTGGCTGAGTATGCCAAGTCCGGCAGGTCCTCTTGCAAGAAATGTGGCAATGCCATAACTGCTCAGGCCCTGAGGTTGGGCCTTGTTACCAGAGATGCTAGAGGCTTTGACATGACCAAATGGCATCACTTGGATTGCTTTACTGAAAAGATTGATTCACTTGATGTGATTAAGGGCTTTGACTTGCTCAAGGATGTTGATCAGGAAGCACTGAAGAAATTGGCAGATGAGTCTGATAAGTTGCCAAAGCGGGGAAAAGGTGATAAAGAAGACAAAATCAAACTGGAGGAAAGCAATTCAAAGAAAATTAAGTTGTCAGTGGCTAATGAGAAAGCTGAGTTGGACATAGTCTTTTCTGCCTCTGAGGTCAAGGACAAGTATAAGGATGCTGAGTTAAAACCAAAATGGAAGGCATTCCAGACAATCATATTTCTTGAGCGGGATGATGGTCTTCATGATTCGGGTAAAATTGCTGCATTTGATTTTGATGGCTGTCTAGCTAAAACATCTGTTAAGAGAGTAGGTGCGGATGCTTGGTCACTCATGTATCCTACAATACCAGAGAAGCTGCAGAGTCTTCATGAAAAGGGCTATAAGCTGGTAATCTTCACCAATGAATCCAATATTGAGCGCTGGAAGAATAAAAGACAGGTTGCTGTGGACTCAAAAATTGGACGTCTTAATAGTTTCATCGAGCAAGTTAAGGTCCCAATGCAGGTTTTCATAGCTTGTGGGATAGGCAAGTCTGGCGGTAAAGCAGATGATCCTTTTCGCAAACCTAATCCTGGGATGTGGCATATTATGGAGAAACATTTCAACTCTGGCATTCCAATTGATATGGATCAATCCTTTTATGTTGGTGATGCTGCTGGGAGACCCAATGATCATAGTGATGCTGATATAAAATTTGCACAGGCCATAGGATTGAAATTTCACGTTCCTGAGGAATACTTCAGCACTTGA
Protein:  
MPSNIVAEYAKSGRSSCKKCGNAITAQALRLGLVTRDARGFDMTKWHHLDCFTEKIDSLDVIKGFDLLKDVDQEALKKLADESDKLPKRGKGDKEDKIKLEESNSKKIKLSVANEKAELDIVFSASEVKDKYKDAELKPKWKAFQTIIFLERDDGLHDSGKIAAFDFDGCLAKTSVKRVGADAWSLMYPTIPEKLQSLHEKGYKLVIFTNESNIERWKNKRQVAVDSKIGRLNSFIEQVKVPMQVFIACGIGKSGGKADDPFRKPNPGMWHIMEKHFNSGIPIDMDQSFYVGDAAGRPNDHSDADIKFAQAIGLKFHVPEEYFST